Files are:
shinyPPV.Rmd    Interactive Markdown document. To run,
  install 'shiny' and dependencies.
  Designed to demonstrate how the probability
  of a real effect changes with changes in the
  prior proportion of real effects.
rethinkORcrisis.Rmd: Markdown for slides for talk on reproducibility
  in science.  Open in RStudio.  Click on 'Knit HTML' to get HTML file, ...
  The file osc.bib should be in the same directory.  References
  that do not fit onto the final slide are omitted.  To get all
  references, process with output an HTML document.

The HTML output displays best under Chrome.  Click on "Open in
  browser", then from the Chrome View dropdown menu, select
  "Enter Presentation Mode".   If Chrome is not the default
  browser, the link from the browser window can be copied to
  Chrome and opened from there.

rethinkORcrisis-slides.pdf omits some of the formatting apparent in the
  HTML file.  All text is black or grayscale.  NB also
  rethinkORcrisis-bklt.pdf

The 'short-reproduce' files are for the later shortened version
  of the talk that was presented at the 2015 Joint NZSA+ORSNZ
  Conference in Christchurch, Nov 24-26.

The 'betterScience' files are for an earlier version of the talk.

hurricnames.Rmd  Markdown file; examines data on deaths from named
  Atlantic hurricanes that made landfall in the US mainland.
  Open in RStudio.  Click on 'Knit HTML' to get HTML file, ...

John Maindonald
Nov 4 2015.